R Analysis

Copy the tarball containing analysis results to your local machine.

/data/containers/seurat.tar.gz

Using scp, transfer the file to your own bactsrv account:

scp seurat.tar.gz USERNAME@bactsrv.nuigalway.ie:/home/USERNAME

Close the connection to lugh and move to your local machine. Create a directory in your home directory and move there:

mkdir ~/scRNA-Seq/
cd ~/scRNA-Seq

Now download the tar file and unzip it.

scp USERNAME@bactsrv.nuigalway.ie:/home/USERNAME/seurat.tar.gz ./ && tar -xvf seurat.tar.gz